Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EHT25_18405 | Not Available | Positive | 4571572 - 4572621 | 37396.1 |
| four-carbon acid sugar kinase family protein | EHT25_18410 | Not Available | Positive | 4572548 - 4573759 | 44156.4 |
| sodium transporter | EHT25_18415 | Not Available | Positive | 4573776 - 4575413 | 59808.9 |
| glycoside hydrolase family 127 protein | EHT25_18420 | Not Available | Positive | 4575714 - 4577753 | 75654.4 |
| hypothetical protein | EHT25_18425 | Not Available | Negative | 4577755 - 4580064 | 87319.5 |
| glycoside hydrolase | EHT25_18430 | Not Available | Positive | 4580201 - 4581751 | 59809.6 |
| arac family transcriptional regulator | EHT25_18435 | Not Available | Negative | 4581837 - 4582733 | 34361.7 |
| duf3826 domain-containing protein | EHT25_18440 | Not Available | Positive | 4583216 - 4583893 | 25342.2 |
| tonb-dependent receptor | EHT25_18445 | Not Available | Positive | 4583941 - 4587153 | 117224.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_18450 | Not Available | Positive | 4587165 - 4588940 | 65704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
