Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT25_18350 | Not Available | Positive | 4551801 - 4554854 | 111722.0 |
| laci family transcriptional regulator | EHT25_18355 | Not Available | Negative | 4554913 - 4555926 | 37030.6 |
| class 1 fructose-bisphosphatase | EHT25_18360 | Not Available | Positive | 4556225 - 4557223 | 36501.7 |
| abc transporter permease | EHT25_18365 | Not Available | Negative | 4557297 - 4559717 | 89950.6 |
| polysaccharide lyase | EHT25_18370 | Not Available | Positive | 4560650 - 4562290 | 60439.7 |
| six-hairpin glycosidase | EHT25_18380 | Not Available | Positive | 4565604 - 4567436 | 68517.4 |
| duf3826 domain-containing protein | EHT25_18385 | Not Available | Positive | 4567464 - 4568171 | 26315.4 |
| sialidase | EHT25_18390 | Not Available | Positive | 4568224 - 4569354 | 41531.7 |
| iron-containing alcohol dehydrogenase | EHT25_18395 | Not Available | Positive | 4569368 - 4570516 | 40734.5 |
| dihydrodipicolinate synthase family protein | EHT25_18400 | Not Available | Positive | 4570519 - 4571439 | 33768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
