Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | EHT25_18150 | Not Available | Positive | 4501108 - 4502943 | 69087.3 |
| tetr/acrr family transcriptional regulator | EHT25_18155 | Not Available | Positive | 4503153 - 4503770 | 23699.1 |
| tolc family protein | EHT25_18160 | Not Available | Positive | 4503839 - 4505104 | 47389.9 |
| hlyd family efflux transporter periplasmic adaptor subunit | EHT25_18165 | Not Available | Positive | 4505127 - 4506056 | 33836.0 |
| abc transporter atp-binding protein | EHT25_18170 | Not Available | Positive | 4506160 - 4507083 | 34476.8 |
| abc transporter atp-binding protein | EHT25_18175 | Not Available | Positive | 4507089 - 4507823 | 26889.3 |
| abc transporter permease | EHT25_18180 | Not Available | Positive | 4507945 - 4509051 | 40809.3 |
| abc transporter permease | EHT25_18185 | Not Available | Positive | 4509048 - 4510163 | 41472.7 |
| mfs transporter | EHT25_18190 | Not Available | Positive | 4510340 - 4511671 | 48943.8 |
| hypothetical protein | EHT25_18195 | Not Available | Positive | 4511824 - 4514232 | 90419.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
