Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | EHT25_01755 | Not Available | Negative | 399949 - 401394 | 53908.4 |
| duf1553 domain-containing protein | EHT25_01760 | Not Available | Negative | 401400 - 404744 | 125820.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_01765 | Not Available | Negative | 404890 - 406518 | 60786.5 |
| tonb-dependent receptor | EHT25_01770 | Not Available | Negative | 406530 - 409886 | 123235.0 |
| duf4974 domain-containing protein | EHT25_01775 | Not Available | Negative | 409924 - 410961 | 39748.3 |
| sigma-70 family rna polymerase sigma factor | EHT25_01780 | Not Available | Negative | 411208 - 411819 | 23511.3 |
| tonb-dependent receptor | EHT25_01785 | Not Available | Negative | 412004 - 414868 | 107052.0 |
| glpgli family protein | EHT25_01790 | Not Available | Negative | 414966 - 415790 | 30261.0 |
| sensor histidine kinase | EHT25_01795 | Not Available | Positive | 415965 - 417449 | 56836.7 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 416873 - 417326 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
