Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | EHT25_17645 | Not Available | Positive | 4383190 - 4384425 | 46111.7 |
| hypothetical protein | EHT25_17650 | Not Available | Positive | 4384582 - 4385205 | 22105.4 |
| hypothetical protein | EHT25_17655 | Not Available | Positive | 4385418 - 4386062 | 22749.2 |
| alpha/beta hydrolase | EHT25_17660 | Not Available | Positive | 4386255 - 4386983 | 26160.1 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EHT25_17665 | Not Available | Positive | 4387222 - 4388349 | 40740.9 |
| n-acetylornithine carbamoyltransferase | EHT25_17670 | Not Available | Positive | 4388378 - 4389325 | 35555.5 |
| acetylglutamate kinase | EHT25_17675 | Not Available | Positive | 4389322 - 4390119 | 28277.3 |
| nlpc/p60 family protein | EHT25_17680 | Not Available | Negative | 4390110 - 4390658 | 20423.7 |
| esterase-like activity of phytase family protein | EHT25_17685 | Not Available | Negative | 4390890 - 4391825 | 35535.9 |
| hypothetical protein | EHT25_17690 | Not Available | Negative | 4391886 - 4392677 | 30797.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
