Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EHT25_01705 | Not Available | Negative | 387444 - 388355 | 33875.6 |
| rna polymerase sigma-70 factor | EHT25_01710 | Not Available | Positive | 388643 - 389224 | 22592.2 |
| duf4974 domain-containing protein | EHT25_01715 | Not Available | Positive | 389331 - 390425 | 40906.6 |
| hypothetical protein | EHT25_01720 | Not Available | Positive | 390504 - 392477 | 72262.3 |
| dna-binding response regulator | EHT25_01725 | Not Available | Negative | 392484 - 393212 | 28419.8 |
| ghkl domain-containing protein | EHT25_01730 | Not Available | Negative | 393256 - 394389 | 44264.6 |
| tonb-dependent receptor | EHT25_01735 | Not Available | Positive | 394701 - 397052 | 86941.0 |
| m42 family peptidase | EHT25_01740 | Not Available | Positive | 397145 - 398227 | 39930.7 |
| duf2490 domain-containing protein | EHT25_01745 | Not Available | Positive | 398437 - 399219 | 29892.5 |
| hypothetical protein | EHT25_01750 | Not Available | Positive | 399326 - 399952 | 23815.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
