Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EHT25_17340 | Not Available | Positive | 4303612 - 4305255 | 61349.8 |
| duf4976 domain-containing protein | EHT25_17345 | Not Available | Positive | 4305545 - 4307023 | 55346.6 |
| arylsulfatase | EHT25_17350 | Not Available | Positive | 4307055 - 4308650 | 60045.1 |
| amidase | EHT25_17355 | Not Available | Negative | 4308680 - 4310332 | 59487.4 |
| dephospho-coa kinase | EHT25_17360 | Not Available | Negative | 4310431 - 4311039 | 22956.6 |
| hypothetical protein | EHT25_17365 | Not Available | Negative | 4311048 - 4311836 | 29019.7 |
| preprotein translocase subunit yajc | EHT25_17370 | Not Available | Negative | 4311970 - 4312236 | 9988.39 |
| duf1573 domain-containing protein | EHT25_17375 | Not Available | Negative | 4312358 - 4312798 | 15963.2 |
| ytxh domain-containing protein | EHT25_17380 | Not Available | Negative | 4312864 - 4313166 | 11170.5 |
| transcription antitermination factor nusb | EHT25_17385 | Not Available | Negative | 4313311 - 4314447 | 43794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
