Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | EHT25_17290 | Not Available | Negative | 4290682 - 4291998 | 46570.3 |
| hypothetical protein | EHT25_17295 | Not Available | Negative | 4292251 - 4292610 | 13641.3 |
| hypothetical protein | EHT25_17300 | Not Available | Positive | 4292877 - 4294043 | 43658.7 |
| dna-binding response regulator | EHT25_17305 | Not Available | Positive | 4294071 - 4294817 | 28289.8 |
| hypothetical protein | EHT25_17310 | Not Available | Positive | 4294938 - 4295243 | 11985.3 |
| uma2 family endonuclease | EHT25_17315 | Not Available | Positive | 4295390 - 4295953 | 21826.2 |
| s9 family peptidase | EHT25_17320 | Not Available | Negative | 4296016 - 4298211 | 83435.1 |
| sigma-70 family rna polymerase sigma factor | EHT25_17325 | Not Available | Positive | 4298344 - 4298949 | 23734.7 |
| duf4974 domain-containing protein | EHT25_17330 | Not Available | Positive | 4299016 - 4300083 | 40031.8 |
| susc/raga family tonb-linked outer membrane protein | EHT25_17335 | Not Available | Positive | 4300249 - 4303596 | 121524.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
