Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EHT25_17085 | Not Available | Positive | 4241357 - 4241800 | 16491.2 |
| sdr family nad(p)-dependent oxidoreductase | EHT25_17090 | Not Available | Positive | 4241973 - 4242692 | 26140.3 |
| smp-30/gluconolactonase/lre family protein | EHT25_17095 | Not Available | Positive | 4242740 - 4243663 | 34486.0 |
| hypothetical protein | EHT25_17100 | Not Available | Negative | 4243742 - 4244251 | 17760.5 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_17105 | Not Available | Negative | 4244280 - 4245761 | 53501.2 |
| susc/raga family tonb-linked outer membrane protein | EHT25_17110 | Not Available | Negative | 4245785 - 4248916 | 112436.0 |
| amidohydrolase | EHT25_17115 | Not Available | Positive | 4249404 - 4250735 | 47653.6 |
| m48 family peptidase | EHT25_17120 | Not Available | Negative | 4250846 - 4251628 | 28378.0 |
| acyltransferase | EHT25_17125 | Not Available | Negative | 4251752 - 4252969 | 47356.9 |
| dna-directed rna polymerase subunit delta | EHT25_17130 | Not Available | Negative | 4253152 - 4254048 | 33274.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
