Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | EHT25_16980 | Not Available | Negative | 4221078 - 4222226 | 42471.9 |
| polyprenyltransferase | EHT25_16985 | Not Available | Negative | 4222321 - 4223196 | 30469.5 |
| hydrolase tatd | EHT25_16990 | Not Available | Negative | 4223290 - 4224222 | 34725.2 |
| duf4136 domain-containing protein | EHT25_16995 | Not Available | Positive | 4224477 - 4225127 | 24029.0 |
| hypothetical protein | EHT25_17000 | Not Available | Positive | 4225194 - 4225874 | 25085.1 |
| integrase | EHT25_17010 | Not Available | Negative | 4226682 - 4227569 | 33769.4 |
| 30s ribosomal protein s21 | EHT25_17015 | Not Available | Negative | 4227670 - 4227867 | 7673.51 |
| phosphatase | EHT25_17020 | Not Available | Positive | 4228015 - 4228944 | 34524.6 |
| paai family thioesterase | EHT25_17025 | Not Available | Positive | 4229035 - 4229526 | 17352.9 |
| sdr family nad(p)-dependent oxidoreductase | EHT25_17030 | Not Available | Negative | 4229624 - 4230376 | 26514.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
