Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_16830 | Not Available | Negative | 4177614 - 4180604 | 110273.0 |
| duf1080 domain-containing protein | EHT25_16835 | Not Available | Negative | 4180645 - 4182195 | 58026.2 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_16840 | Not Available | Negative | 4182417 - 4183925 | 55939.0 |
| susc/raga family tonb-linked outer membrane protein | EHT25_16845 | Not Available | Negative | 4183947 - 4187318 | 123793.0 |
| duf4974 domain-containing protein | EHT25_16850 | Not Available | Negative | 4187554 - 4188705 | 42790.0 |
| sigma-70 family rna polymerase sigma factor | EHT25_16855 | Not Available | Positive | 4188719 - 4189315 | 22904.8 |
| hypothetical protein | EHT25_16860 | Not Available | Negative | 4189401 - 4191287 | 70636.8 |
| hypothetical protein | EHT25_16865 | Not Available | Positive | 4191456 - 4192754 | 48885.1 |
| right-handed parallel beta-helix repeat-containing protein | EHT25_16870 | Not Available | Positive | 4192830 - 4194938 | 78396.7 |
| duf1801 domain-containing protein | EHT25_16875 | Not Available | Positive | 4195003 - 4195434 | 16256.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
