Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | EHT25_16480 | Not Available | Positive | 4096667 - 4097410 | 27467.4 |
| gfo/idh/moca family oxidoreductase | EHT25_16485 | Not Available | Positive | 4097598 - 4098947 | 50348.5 |
| hypothetical protein | EHT25_16490 | Not Available | Positive | 4099066 - 4100094 | 37611.9 |
| hypothetical protein | EHT25_16495 | Not Available | Positive | 4100328 - 4100759 | 17004.9 |
| hypothetical protein | EHT25_16500 | Not Available | Negative | 4100772 - 4101173 | 15505.9 |
| type 1 glutamine amidotransferase domain-containing protein | EHT25_16505 | Not Available | Positive | 4101372 - 4102052 | 25898.9 |
| capsular biosynthesis protein | EHT25_16510 | Not Available | Negative | 4102054 - 4102824 | 29066.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EHT25_16515 | Not Available | Negative | 4103023 - 4103559 | 20018.7 |
| orotidine-5'-phosphate decarboxylase | EHT25_16520 | Not Available | Positive | 4103698 - 4104510 | 29750.3 |
| duf2851 family protein | EHT25_16525 | Not Available | Positive | 4104618 - 4105895 | 48777.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
