Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | EHT25_16430 | Not Available | Negative | 4081733 - 4082911 | 44480.2 |
| nucleotidyltransferase | EHT25_16435 | Not Available | Positive | 4083154 - 4084065 | 34112.2 |
| hypothetical protein | EHT25_16440 | Not Available | Positive | 4084507 - 4084914 | 14497.5 |
| amp-dependent synthetase | EHT25_16445 | Not Available | Negative | 4085074 - 4086765 | 63393.9 |
| t9ss c-terminal target domain-containing protein | EHT25_16450 | Not Available | Positive | 4086998 - 4088434 | 51246.3 |
| cap domain-containing protein | EHT25_16455 | Not Available | Positive | 4088560 - 4089417 | 31509.4 |
| iron dicitrate transport regulator fecr | EHT25_16460 | Not Available | Positive | 4089654 - 4090490 | 31709.8 |
| tonb-dependent receptor | EHT25_16465 | Not Available | Positive | 4090605 - 4093742 | 114652.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_16470 | Not Available | Positive | 4093793 - 4095490 | 63371.0 |
| sugar phosphate isomerase/epimerase | EHT25_16475 | Not Available | Positive | 4095643 - 4096566 | 33773.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
