Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane or secreted protein | EHT25_01550 | Not Available | Positive | 351472 - 352188 | 26548.4 |
| peptidase m19 | EHT25_01555 | Not Available | Positive | 352225 - 353304 | 39783.9 |
| duf4126 domain-containing protein | EHT25_01560 | Not Available | Negative | 353348 - 353917 | 19853.8 |
| abc transporter atp-binding protein | EHT25_01565 | Not Available | Positive | 354099 - 355859 | 66513.2 |
| hypothetical protein | EHT25_01570 | Not Available | Negative | 355926 - 356195 | 9728.85 |
| penicillin-binding protein | EHT25_01575 | Not Available | Negative | 356297 - 358870 | 97798.3 |
| peptide-methionine (r)-s-oxide reductase | EHT25_01580 | Not Available | Negative | 359093 - 359581 | 18001.7 |
| fasciclin domain-containing protein | EHT25_01585 | Not Available | Negative | 359680 - 360240 | 19292.7 |
| anti-sigma factor | EHT25_01590 | Not Available | Negative | 360419 - 361294 | 32621.3 |
| rna polymerase sigma factor | EHT25_01595 | Not Available | Negative | 361291 - 361839 | 21174.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
