Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase | EHT25_15820 | Not Available | Negative | 3933225 - 3934202 | 36563.4 |
| m20/m25/m40 family metallo-hydrolase | EHT25_15825 | Not Available | Negative | 3934206 - 3935321 | 41405.6 |
| serine protease | EHT25_15830 | Not Available | Negative | 3935311 - 3936195 | 34078.5 |
| dna-binding response regulator | EHT25_15835 | Not Available | Negative | 3936242 - 3936952 | 27195.9 |
| sigma-70 family rna polymerase sigma factor | EHT25_15840 | Not Available | Positive | 3937464 - 3938018 | 21456.8 |
| hypothetical protein | EHT25_15845 | Not Available | Positive | 3938915 - 3939199 | 10832.8 |
| ftsx-like permease family protein | EHT25_15850 | Not Available | Negative | 3939481 - 3941874 | 87377.8 |
| abc transporter atp-binding protein | EHT25_15855 | Not Available | Negative | 3941879 - 3942577 | 25119.4 |
| arac family transcriptional regulator | EHT25_15860 | Not Available | Negative | 3942650 - 3943780 | 43529.8 |
| exopolygalacturonase | EHT25_15865 | Not Available | Negative | 3943892 - 3945220 | 49183.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
