Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | EHT25_15770 | Not Available | Positive | 3924479 - 3925303 | 31433.5 |
| hypothetical protein | EHT25_15775 | Not Available | Negative | 3925309 - 3925656 | 12824.4 |
| ygiq family radical sam protein | EHT25_15780 | Not Available | Positive | 3925866 - 3927767 | 72599.0 |
| nadp-dependent isocitrate dehydrogenase | EHT25_15785 | Not Available | Negative | 3927843 - 3929063 | 45729.6 |
| type ii toxin-antitoxin system vapc family toxin | EHT25_15790 | Not Available | Negative | 3929189 - 3929575 | 14875.1 |
| duf2281 domain-containing protein | EHT25_15795 | Not Available | Negative | 3929575 - 3929781 | 7955.42 |
| mfs transporter | EHT25_15800 | Not Available | Negative | 3929993 - 3931243 | 45946.0 |
| duf1080 domain-containing protein | EHT25_15805 | Not Available | Negative | 3931304 - 3931942 | 24378.3 |
| hypothetical protein | EHT25_15810 | Not Available | Negative | 3932066 - 3932644 | 22936.6 |
| dmt family transporter | EHT25_15815 | Not Available | Negative | 3932690 - 3933133 | 15651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
