Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | EHT25_15670 | Not Available | Positive | 3897465 - 3898682 | 43981.2 |
| adenosylhomocysteinase | EHT25_15675 | Not Available | Positive | 3898799 - 3900115 | 48131.6 |
| uma2 family endonuclease | EHT25_15680 | Not Available | Positive | 3900272 - 3900847 | 22139.2 |
| hypothetical protein | EHT25_15685 | Not Available | Negative | 3900929 - 3901363 | 15885.3 |
| hypothetical protein | EHT25_15690 | Not Available | Negative | 3901360 - 3903945 | 92960.9 |
| hypothetical protein | EHT25_15695 | Not Available | Negative | 3903942 - 3905927 | 74295.6 |
| hypothetical protein | EHT25_15700 | Not Available | Negative | 3905949 - 3910133 | 150355.0 |
| hypothetical protein | EHT25_15705 | Not Available | Negative | 3910117 - 3911811 | 61173.8 |
| dna-binding response regulator | EHT25_15710 | Not Available | Negative | 3912016 - 3912642 | 23187.4 |
| tetratricopeptide repeat protein | EHT25_15715 | Not Available | Negative | 3912714 - 3914609 | 71735.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
