Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf29 family protein | EHT25_01500 | Not Available | Positive | 341775 - 342212 | 17049.1 |
| nicotinamide riboside transporter pnuc | EHT25_01505 | Not Available | Positive | 342261 - 342926 | 25623.4 |
| aaa family atpase | EHT25_01510 | Not Available | Positive | 342923 - 343888 | 37036.4 |
| 3'-5' exonuclease | EHT25_01515 | Not Available | Negative | 343880 - 344494 | 23502.1 |
| class ii fumarate hydratase | EHT25_01520 | Not Available | Positive | 344677 - 346080 | 50607.8 |
| gnat family n-acetyltransferase | EHT25_01525 | Not Available | Negative | 346168 - 347763 | 60947.0 |
| threonine aldolase | EHT25_01530 | Not Available | Negative | 347862 - 348893 | 37566.5 |
| porin family protein | EHT25_01535 | Not Available | Negative | 349021 - 349575 | 19298.0 |
| sterol desaturase family protein | EHT25_01540 | Not Available | Positive | 349806 - 350708 | 34779.6 |
| n-acetyltransferase | EHT25_01545 | Not Available | Negative | 350805 - 351113 | 11640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
