Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EHT25_15515 | Not Available | Positive | 3869565 - 3870008 | 16597.9 |
| peptidylprolyl isomerase | EHT25_15520 | Not Available | Positive | 3870062 - 3870775 | 27022.8 |
| nad(p)-dependent oxidoreductase | EHT25_15525 | Not Available | Positive | 3870797 - 3871696 | 33134.6 |
| hypothetical protein | EHT25_15530 | Not Available | Positive | 3871824 - 3872258 | 15662.2 |
| hypothetical protein | EHT25_15535 | Not Available | Negative | 3872266 - 3872916 | 26124.2 |
| duf2029 domain-containing protein | EHT25_15540 | Not Available | Positive | 3873096 - 3874400 | 48945.0 |
| hypothetical protein | EHT25_15550 | Not Available | Negative | 3874892 - 3875209 | 11711.5 |
| sigma-70 family rna polymerase sigma factor | EHT25_15555 | Not Available | Negative | 3875222 - 3875872 | 24887.4 |
| gluconate 2-dehydrogenase subunit 3 family protein | EHT25_15560 | Not Available | Positive | 3876195 - 3876764 | 20470.7 |
| gmc family oxidoreductase | EHT25_15565 | Not Available | Positive | 3876912 - 3878630 | 64070.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
