Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | EHT25_15465 | Not Available | Negative | 3859875 - 3861032 | 41897.9 |
| shikimate dehydrogenase | EHT25_15470 | Not Available | Negative | 3861107 - 3861859 | 28123.8 |
| hypothetical protein | EHT25_15475 | Not Available | Negative | 3861923 - 3862471 | 19950.6 |
| glucose-1-phosphate thymidylyltransferase | EHT25_15480 | Not Available | Positive | 3862632 - 3863837 | 43910.4 |
| dna polymerase iii subunit delta | EHT25_15485 | Not Available | Positive | 3863937 - 3865082 | 43138.9 |
| atp-dependent zinc protease | EHT25_15490 | Not Available | Positive | 3865079 - 3865555 | 18019.1 |
| 30s ribosomal protein s6--l-glutamate ligase | EHT25_15495 | Not Available | Positive | 3865622 - 3866524 | 32342.3 |
| sdr family nad(p)-dependent oxidoreductase | EHT25_15500 | Not Available | Positive | 3866958 - 3867770 | 29148.8 |
| crp/fnr family transcriptional regulator | EHT25_15505 | Not Available | Positive | 3867775 - 3868344 | 21846.3 |
| hydroxymethylbilane synthase | EHT25_15510 | Not Available | Positive | 3868615 - 3869538 | 33689.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
