Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | EHT25_01450 | Not Available | Negative | 329454 - 330569 | 41276.8 |
| duf3368 domain-containing protein | EHT25_01455 | Not Available | Negative | 330571 - 331047 | 17500.5 |
| upf0175 family protein | EHT25_01460 | Not Available | Negative | 331019 - 331255 | 8701.53 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EHT25_01465 | Not Available | Negative | 331300 - 332493 | 43550.9 |
| sulfite exporter taue/safe family protein | EHT25_01470 | Not Available | Negative | 332585 - 333643 | 37253.5 |
| s8 family peptidase | EHT25_01475 | Not Available | Negative | 333871 - 335043 | 40766.1 |
| hypothetical protein | EHT25_01480 | Not Available | Positive | 335245 - 336318 | 39402.8 |
| hypothetical protein | EHT25_01485 | Not Available | Positive | 336456 - 337874 | 52250.5 |
| leucine--trna ligase | EHT25_01490 | Not Available | Positive | 338018 - 340825 | 107280.0 |
| exodeoxyribonuclease iii | EHT25_01495 | Not Available | Positive | 340928 - 341728 | 30302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
