Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | EHT25_14860 | Not Available | Positive | 3711778 - 3712128 | 12987.9 |
| duf4976 domain-containing protein | EHT25_14865 | Not Available | Positive | 3712514 - 3713938 | 53254.0 |
| acetylxylan esterase | EHT25_14875 | Not Available | Negative | 3716153 - 3717532 | 50468.2 |
| sialate o-acetylesterase | EHT25_14880 | Not Available | Negative | 3717571 - 3719463 | 69820.0 |
| heme-binding protein | EHT25_14885 | Not Available | Positive | 3719795 - 3722461 | 96562.5 |
| (fe-s)-binding protein | EHT25_14890 | Not Available | Positive | 3722692 - 3723429 | 27210.9 |
| lactate utilization protein | EHT25_14895 | Not Available | Positive | 3723429 - 3724823 | 52480.0 |
| lactate utilization protein b/c | EHT25_14900 | Not Available | Positive | 3724855 - 3725439 | 20813.1 |
| hypothetical protein | EHT25_14905 | Not Available | Negative | 3725500 - 3726405 | 33970.7 |
| para family protein | EHT25_14910 | Not Available | Negative | 3726402 - 3727367 | 35408.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
