Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EHT25_14760 | Not Available | Negative | 3684626 - 3687898 | 121489.0 |
| fecr family protein | EHT25_14765 | Not Available | Negative | 3688216 - 3689331 | 42149.2 |
| sigma-70 family rna polymerase sigma factor | EHT25_14770 | Not Available | Positive | 3689580 - 3690203 | 24616.6 |
| peptidase s8 | EHT25_14775 | Not Available | Positive | 3690663 - 3692288 | 59362.0 |
| gliding motility-associated c-terminal domain-containing protein | EHT25_14780 | Not Available | Negative | 3692321 - 3693847 | 56261.0 |
| duf5009 domain-containing protein | EHT25_14785 | Not Available | Negative | 3693916 - 3695139 | 44744.2 |
| thua domain-containing protein | EHT25_14790 | Not Available | Negative | 3695253 - 3696032 | 29771.8 |
| fecr family protein | EHT25_14795 | Not Available | Positive | 3696232 - 3697356 | 42305.7 |
| rida family protein | EHT25_14800 | Not Available | Positive | 3697459 - 3697920 | 16595.2 |
| selenocysteine synthase | EHT25_14805 | Not Available | Positive | 3697989 - 3699212 | 44462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
