Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m1 family peptidase | EHT25_14710 | Not Available | Negative | 3668133 - 3670526 | 90775.6 |
| duf885 domain-containing protein | EHT25_14715 | Not Available | Negative | 3670644 - 3672389 | 67398.6 |
| hypothetical protein | EHT25_14720 | Not Available | Positive | 3672590 - 3674074 | 55405.9 |
| glycoside hydrolase family 2 | EHT25_14725 | Not Available | Positive | 3674282 - 3676096 | 68580.5 |
| hypothetical protein | EHT25_14730 | Not Available | Negative | 3676027 - 3677535 | 56326.1 |
| diheme cytochrome c-553 | EHT25_14735 | Not Available | Positive | 3677721 - 3678332 | 22248.8 |
| histidinol-phosphatase | EHT25_14740 | Not Available | Negative | 3678421 - 3680346 | 73438.2 |
| cold-shock protein | EHT25_14745 | Not Available | Negative | 3680643 - 3680834 | 7045.34 |
| alpha-glucosidase | EHT25_14750 | Not Available | Negative | 3680977 - 3682839 | 70557.7 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_14755 | Not Available | Negative | 3682933 - 3684600 | 62466.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
