Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_14660 | Not Available | Negative | 3649191 - 3650222 | 38841.2 |
| phosphatase pap2 family protein | EHT25_14665 | Not Available | Negative | 3651101 - 3652405 | 48917.5 |
| rna-binding protein | EHT25_14670 | Not Available | Negative | 3652510 - 3655911 | 125292.0 |
| hypothetical protein | EHT25_14675 | Not Available | Negative | 3655946 - 3656653 | 26522.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_14680 | Not Available | Negative | 3656740 - 3658587 | 68840.6 |
| tonb-dependent receptor | EHT25_14685 | Not Available | Negative | 3658609 - 3661845 | 118229.0 |
| amino acid permease | EHT25_14690 | Not Available | Negative | 3662522 - 3663889 | 49470.4 |
| dipeptide epimerase | EHT25_14695 | Not Available | Negative | 3663893 - 3664966 | 38946.0 |
| duf1611 domain-containing protein | EHT25_14700 | Not Available | Negative | 3664956 - 3666026 | 38834.9 |
| abc transporter atp-binding protein | EHT25_14705 | Not Available | Positive | 3666309 - 3668075 | 66440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
