Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | EHT25_14510 | Not Available | Positive | 3608721 - 3612878 | 155892.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EHT25_14515 | Not Available | Positive | 3612967 - 3613464 | 18120.8 |
| hypothetical protein | EHT25_14520 | Not Available | Positive | 3613842 - 3614795 | 36844.1 |
| hypothetical protein | EHT25_14525 | Not Available | Negative | 3614805 - 3616511 | 65323.1 |
| glucuronyl hydrolase | EHT25_14530 | Not Available | Negative | 3616583 - 3617788 | 45437.2 |
| alginate lyase | EHT25_14535 | Not Available | Negative | 3618101 - 3619276 | 44485.4 |
| tonb-dependent receptor | EHT25_14540 | Not Available | Positive | 3619671 - 3622748 | 110179.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_14545 | Not Available | Positive | 3622774 - 3624213 | 52940.7 |
| hypothetical protein | EHT25_14550 | Not Available | Negative | 3624301 - 3625062 | 29181.6 |
| na+/h+ antiporter nhaa | EHT25_14555 | Not Available | Positive | 3625151 - 3626404 | 44326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
