Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EHT25_14460 | Not Available | Positive | 3594581 - 3595207 | 24687.8 |
| fecr family protein | EHT25_14465 | Not Available | Positive | 3595280 - 3596383 | 41896.9 |
| susc/raga family tonb-linked outer membrane protein | EHT25_14470 | Not Available | Positive | 3596517 - 3600023 | 128096.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_14475 | Not Available | Positive | 3600138 - 3601655 | 55265.2 |
| hypothetical protein | EHT25_14480 | Not Available | Positive | 3601686 - 3602630 | 35393.5 |
| 2-dehydro-3-deoxyglucarate aldolase | EHT25_14485 | Not Available | Positive | 3602627 - 3603391 | 27931.4 |
| gntp family permease | EHT25_14490 | Not Available | Positive | 3603533 - 3604966 | 49645.3 |
| 2-hydroxy-3-oxopropionate reductase | EHT25_14495 | Not Available | Positive | 3605141 - 3605998 | 29703.4 |
| mannonate dehydratase | EHT25_14500 | Not Available | Positive | 3606050 - 3607168 | 41670.1 |
| glucarate dehydratase | EHT25_14505 | Not Available | Positive | 3607200 - 3608522 | 48184.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
