Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd | EHT25_14260 | Not Available | Negative | 3549956 - 3552814 | 105906.0 |
| n-acetylmuramoyl-l-alanine amidase | EHT25_14265 | Not Available | Positive | 3553079 - 3553909 | 30776.8 |
| mce family protein | EHT25_14270 | Not Available | Positive | 3553999 - 3554985 | 35153.8 |
| acyl-coa carboxylase subunit beta | EHT25_14275 | Not Available | Positive | 3555123 - 3556751 | 58450.4 |
| hypothetical protein | EHT25_14280 | Not Available | Positive | 3556802 - 3557287 | 18010.2 |
| class i sam-dependent methyltransferase | EHT25_14285 | Not Available | Positive | 3557322 - 3558077 | 28183.2 |
| ghkl domain-containing protein | EHT25_14290 | Not Available | Negative | 3558060 - 3559223 | 44360.6 |
| fad-dependent oxidoreductase | EHT25_14295 | Not Available | Positive | 3559537 - 3561534 | 73452.9 |
| arac family transcriptional regulator | EHT25_14300 | Not Available | Negative | 3561575 - 3562561 | 37948.6 |
| hypothetical protein | EHT25_14305 | Not Available | Positive | 3562669 - 3562902 | 8503.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
