Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | EHT25_14060 | Not Available | Negative | 3492191 - 3492772 | 22284.3 |
| preprotein translocase subunit seca | EHT25_14065 | Not Available | Negative | 3492866 - 3496249 | 128537.0 |
| duf1624 domain-containing protein | EHT25_14070 | Not Available | Negative | 3496508 - 3497668 | 43731.0 |
| hypothetical protein | EHT25_14075 | Not Available | Negative | 3497727 - 3498155 | 15300.7 |
| rna polymerase sigma-70 factor | EHT25_14080 | Not Available | Positive | 3498469 - 3499053 | 23160.4 |
| hypothetical protein | EHT25_14085 | Not Available | Negative | 3499130 - 3499972 | 32023.7 |
| fecr family protein | EHT25_14090 | Not Available | Positive | 3500179 - 3501204 | 38399.3 |
| susc/raga family tonb-linked outer membrane protein | EHT25_14095 | Not Available | Positive | 3501393 - 3504995 | 133521.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_14100 | Not Available | Positive | 3505018 - 3506748 | 65288.7 |
| metallophosphoesterase family protein | EHT25_14105 | Not Available | Positive | 3506855 - 3508075 | 46265.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
