Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | EHT25_14010 | Not Available | Negative | 3470416 - 3471747 | 49744.0 |
| rna-binding protein | EHT25_14015 | Not Available | Negative | 3471910 - 3475272 | 124910.0 |
| rna-binding protein | EHT25_14020 | Not Available | Negative | 3475405 - 3478767 | 123789.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_14025 | Not Available | Negative | 3478927 - 3480408 | 55480.6 |
| tonb-dependent receptor | EHT25_14030 | Not Available | Negative | 3480440 - 3483568 | 113350.0 |
| fad-binding oxidoreductase | EHT25_14035 | Not Available | Positive | 3484115 - 3487054 | 109424.0 |
| hypothetical protein | EHT25_14040 | Not Available | Positive | 3487057 - 3488727 | 63488.4 |
| hypothetical protein | EHT25_14045 | Not Available | Positive | 3488729 - 3488935 | 7527.67 |
| m1 family peptidase | EHT25_14050 | Not Available | Positive | 3489112 - 3490968 | 70450.9 |
| ketoacyl-acp synthase iii | EHT25_14055 | Not Available | Negative | 3491051 - 3491995 | 33893.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
