Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | EHT25_13810 | Not Available | Negative | 3420024 - 3428588 | 297922.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EHT25_13815 | Not Available | Positive | 3428878 - 3429684 | 29978.0 |
| t9ss c-terminal target domain-containing protein | EHT25_13820 | Not Available | Negative | 3429768 - 3436337 | 231488.0 |
| heme-copper oxidase subunit iii | EHT25_13825 | Not Available | Positive | 3436733 - 3437338 | 23374.3 |
| arac family transcriptional regulator | EHT25_13830 | Not Available | Positive | 3437483 - 3438181 | 26160.1 |
| nmra family transcriptional regulator | EHT25_13835 | Not Available | Positive | 3438261 - 3439091 | 30252.9 |
| ycei family protein | EHT25_13840 | Not Available | Negative | 3439155 - 3439715 | 20401.5 |
| hypothetical protein | EHT25_13845 | Not Available | Negative | 3439771 - 3440457 | 24893.7 |
| rieske (2fe-2s) protein | EHT25_13850 | Not Available | Negative | 3440461 - 3440934 | 16940.9 |
| hypothetical protein | EHT25_13855 | Not Available | Negative | 3441013 - 3442686 | 61209.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
