Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | EHT25_13760 | Not Available | Negative | 3410674 - 3410940 | 10156.4 |
| hypothetical protein | EHT25_13765 | Not Available | Positive | 3411219 - 3411413 | 7015.15 |
| hypothetical protein | EHT25_13770 | Not Available | Positive | 3411437 - 3411661 | 8008.15 |
| hypothetical protein | EHT25_13775 | Not Available | Positive | 3411712 - 3411918 | 7444.81 |
| hypothetical protein | EHT25_13780 | Not Available | Positive | 3411971 - 3412339 | 14163.7 |
| cpbp family intramembrane metalloprotease | EHT25_13785 | Not Available | Positive | 3412260 - 3412667 | 16103.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | EHT25_13790 | Not Available | Positive | 3412660 - 3413829 | 44485.1 |
| peptidase domain-containing abc transporter | EHT25_13795 | Not Available | Positive | 3413855 - 3416011 | 80396.5 |
| exo-alpha-sialidase | EHT25_13800 | Not Available | Negative | 3416015 - 3416932 | 32541.6 |
| flagellar motor protein motb | EHT25_13805 | Not Available | Positive | 3417471 - 3419939 | 91822.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
