Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | EHT25_13510 | Not Available | Negative | 3356660 - 3358768 | 77148.9 |
| esterase family protein | EHT25_13515 | Not Available | Negative | 3360324 - 3361190 | 32878.2 |
| duf4142 domain-containing protein | EHT25_13520 | Not Available | Negative | 3361357 - 3361911 | 20305.9 |
| hypothetical protein | EHT25_13525 | Not Available | Positive | 3362438 - 3362890 | 16581.5 |
| duf1684 domain-containing protein | EHT25_13530 | Not Available | Positive | 3362907 - 3363494 | 22330.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | EHT25_13535 | Not Available | Negative | 3363559 - 3365031 | 54562.6 |
| rraa family protein | EHT25_13540 | Not Available | Positive | 3365263 - 3366195 | 34279.4 |
| rraa family protein | EHT25_13545 | Not Available | Positive | 3366206 - 3367138 | 34441.6 |
| recx family transcriptional regulator | EHT25_13550 | Not Available | Positive | 3367228 - 3367692 | 18346.8 |
| class i sam-dependent methyltransferase | EHT25_13555 | Not Available | Negative | 3367755 - 3368450 | 26525.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
