Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_13460 | Not Available | Positive | 3349111 - 3349497 | 14370.9 |
| noncanonical pyrimidine nucleotidase, yjjg family | EHT25_13465 | Not Available | Negative | 3349518 - 3350210 | 26525.5 |
| rna polymerase sigma factor | EHT25_13470 | Not Available | Positive | 3350645 - 3351244 | 23654.3 |
| hypothetical protein | EHT25_13475 | Not Available | Positive | 3351219 - 3351455 | 9084.78 |
| endonuclease iii | EHT25_13480 | Not Available | Positive | 3351595 - 3352254 | 24959.4 |
| nucleoside-diphosphate kinase | EHT25_13485 | Not Available | Negative | 3352323 - 3352742 | 15329.3 |
| bifunctional oligoribonuclease/pap phosphatase nrna | EHT25_13490 | Not Available | Positive | 3352852 - 3353868 | 37962.5 |
| peptidylprolyl isomerase | EHT25_13495 | Not Available | Positive | 3354029 - 3354940 | 32119.6 |
| peptidylprolyl isomerase | EHT25_13500 | Not Available | Positive | 3355049 - 3355951 | 32573.9 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EHT25_13505 | Not Available | Positive | 3356015 - 3356590 | 21095.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
