Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_13410 | Not Available | Negative | 3335031 - 3336533 | 55997.4 |
| susc/raga family tonb-linked outer membrane protein | EHT25_13415 | Not Available | Negative | 3336559 - 3340143 | 130272.0 |
| fecr family protein | EHT25_13420 | Not Available | Negative | 3340183 - 3341463 | 47459.1 |
| sigma-70 family rna polymerase sigma factor | EHT25_13425 | Not Available | Positive | 3341482 - 3342042 | 22085.3 |
| duf3291 domain-containing protein | EHT25_13430 | Not Available | Positive | 3342133 - 3342846 | 27433.9 |
| duf2147 domain-containing protein | EHT25_13435 | Not Available | Negative | 3342830 - 3343288 | 17642.3 |
| carboxypeptidase-like regulatory domain-containing protein | EHT25_13440 | Not Available | Negative | 3343304 - 3345823 | 96183.5 |
| sterol desaturase family protein | EHT25_13445 | Not Available | Negative | 3345820 - 3346707 | 34307.9 |
| hypothetical protein | EHT25_13450 | Not Available | Negative | 3346843 - 3348180 | 49946.0 |
| sigma-70 family rna polymerase sigma factor | EHT25_13455 | Not Available | Negative | 3348173 - 3348772 | 22991.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
