Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_01250 | Not Available | Positive | 282389 - 282826 | 16649.1 |
| pas domain-containing sensor histidine kinase | EHT25_01255 | Not Available | Positive | 283023 - 284564 | 57324.5 |
| duf3037 domain-containing protein | EHT25_01260 | Not Available | Negative | 284583 - 284963 | 14378.5 |
| aminotransferase class i and ii | EHT25_01265 | Not Available | Negative | 284944 - 285744 | 29979.7 |
| phosphoribosylformylglycinamidine synthase subunit purl | EHT25_01270 | Not Available | Positive | 285913 - 288162 | 81246.4 |
| uma2 family endonuclease | EHT25_01275 | Not Available | Positive | 288177 - 288773 | 23142.6 |
| trna pseudouridine(38-40) synthase trua | EHT25_01280 | Not Available | Positive | 288820 - 289584 | 29378.6 |
| xdhc family protein | EHT25_01285 | Not Available | Positive | 289592 - 290638 | 38341.0 |
| nucleotidyltransferase family protein | EHT25_01290 | Not Available | Positive | 290652 - 291242 | 21290.6 |
| dinb family protein | EHT25_01295 | Not Available | Negative | 291280 - 291804 | 19919.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
