Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EHT25_12960 | Not Available | Negative | 3232998 - 3236363 | 124863.0 |
| fecr family protein | EHT25_12965 | Not Available | Negative | 3236494 - 3237552 | 40083.8 |
| sigma-70 family rna polymerase sigma factor | EHT25_12970 | Not Available | Negative | 3237761 - 3238417 | 25786.1 |
| alpha-l-fucosidase | EHT25_12975 | Not Available | Negative | 3238749 - 3240509 | 66208.8 |
| l-fucose:h+ symporter permease | EHT25_12980 | Not Available | Negative | 3240521 - 3241786 | 45742.3 |
| l-rhamnose mutarotase | EHT25_12985 | Not Available | Negative | 3241790 - 3242128 | 12725.3 |
| sdr family oxidoreductase | EHT25_12990 | Not Available | Negative | 3242157 - 3242921 | 27186.5 |
| mandelate racemase | EHT25_12995 | Not Available | Negative | 3242935 - 3244161 | 45209.2 |
| arac family transcriptional regulator | EHT25_13000 | Not Available | Positive | 3244345 - 3245250 | 34196.2 |
| haloalkane dehalogenase | EHT25_13005 | Not Available | Negative | 3245400 - 3246317 | 34716.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
