Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | EHT25_12910 | Not Available | Negative | 3217848 - 3218555 | 26944.9 |
| duf4976 domain-containing protein | EHT25_12915 | Not Available | Negative | 3218618 - 3220066 | 54619.8 |
| s9 family peptidase | EHT25_12920 | Not Available | Negative | 3220128 - 3222242 | 79563.8 |
| alpha-l-fucosidase precursor | EHT25_12925 | Not Available | Negative | 3222270 - 3223436 | 44053.1 |
| sgnh/gdsl hydrolase family protein | EHT25_12930 | Not Available | Negative | 3223481 - 3224164 | 24909.3 |
| auracyanin family protein | EHT25_12935 | Not Available | Negative | 3224179 - 3226170 | 73477.4 |
| duf1080 domain-containing protein | EHT25_12940 | Not Available | Negative | 3226187 - 3228025 | 67828.3 |
| sialate o-acetylesterase | EHT25_12945 | Not Available | Negative | 3228041 - 3230020 | 73016.7 |
| n-acetylgalactosamine 6-sulfate sulfatase | EHT25_12950 | Not Available | Negative | 3230061 - 3231449 | 51628.5 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_12955 | Not Available | Negative | 3231486 - 3232979 | 55959.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
