Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_12855 | Not Available | Negative | 3207885 - 3208574 | 25510.7 |
| plp-dependent cysteine synthase family protein | EHT25_12860 | Not Available | Positive | 3208953 - 3210020 | 39150.6 |
| nudix domain-containing protein | EHT25_12865 | Not Available | Negative | 3210304 - 3211077 | 30151.1 |
| sugar phosphate isomerase/epimerase | EHT25_12870 | Not Available | Positive | 3211291 - 3212157 | 32327.7 |
| dabb family protein | EHT25_12875 | Not Available | Positive | 3212404 - 3212700 | 11413.4 |
| hypothetical protein | EHT25_12885 | Not Available | Positive | 3213962 - 3214732 | 29494.3 |
| duf4440 domain-containing protein | EHT25_12890 | Not Available | Positive | 3214834 - 3215334 | 18468.2 |
| cupin domain-containing protein | EHT25_12895 | Not Available | Negative | 3215437 - 3215757 | 12018.2 |
| glucosamine-6-phosphate deaminase | EHT25_12900 | Not Available | Negative | 3215763 - 3216527 | 28404.7 |
| n-acetylglucosamine-6-phosphate deacetylase | EHT25_12905 | Not Available | Negative | 3216552 - 3217739 | 42935.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
