Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4038 domain-containing protein | EHT25_12300 | Not Available | Negative | 3070310 - 3071713 | 52622.1 |
| semialdehyde dehydrogenase | EHT25_12305 | Not Available | Negative | 3071735 - 3072568 | 30494.0 |
| sugar phosphate isomerase/epimerase | EHT25_12310 | Not Available | Negative | 3072664 - 3073479 | 30172.6 |
| gfo/idh/moca family oxidoreductase | EHT25_12315 | Not Available | Positive | 3073720 - 3074745 | 38161.7 |
| sugar abc transporter atp-binding protein | EHT25_12320 | Not Available | Positive | 3074759 - 3076234 | 53450.9 |
| srpbcc domain-containing protein | EHT25_12325 | Not Available | Negative | 3076292 - 3076732 | 16585.4 |
| polysaccharide deacetylase | EHT25_12330 | Not Available | Positive | 3076927 - 3077667 | 28325.5 |
| pas domain s-box protein | EHT25_12335 | Not Available | Positive | 3077897 - 3081799 | 147242.0 |
| duf418 domain-containing protein | EHT25_12340 | Not Available | Positive | 3081920 - 3083293 | 52435.5 |
| outer membrane lipoprotein carrier protein lola | EHT25_12345 | Not Available | Negative | 3083304 - 3083933 | 23177.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
