Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | EHT25_12250 | Not Available | Negative | 3060403 - 3061611 | 43073.2 |
| nad-dependent epimerase/dehydratase family protein | EHT25_12255 | Not Available | Positive | 3062017 - 3062907 | 32083.5 |
| arac family transcriptional regulator | EHT25_12260 | Not Available | Positive | 3062920 - 3063840 | 35259.2 |
| aldo/keto reductase | EHT25_12265 | Not Available | Positive | 3063998 - 3064984 | 36153.4 |
| twin-arginine translocation signal domain-containing protein | EHT25_12270 | Not Available | Positive | 3065273 - 3066616 | 50167.4 |
| n-acetyltransferase | EHT25_12275 | Not Available | Negative | 3066758 - 3066940 | 6884.21 |
| cold shock domain-containing protein | EHT25_12280 | Not Available | Positive | 3067123 - 3067578 | 16989.0 |
| is200/is605 family transposase | EHT25_12285 | Not Available | Positive | 3067833 - 3068285 | 17612.9 |
| sugar abc transporter substrate-binding protein | EHT25_12290 | Not Available | Negative | 3068346 - 3069356 | 36515.0 |
| abc transporter permease | EHT25_12295 | Not Available | Negative | 3069361 - 3070299 | 33265.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
