Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | EHT25_12100 | Not Available | Positive | 3009822 - 3012386 | 93086.3 |
| hypothetical protein | EHT25_12105 | Not Available | Positive | 3013002 - 3015905 | 104517.0 |
| polysaccharide export protein | EHT25_12110 | Not Available | Positive | 3016765 - 3017565 | 29083.5 |
| polysaccharide biosynthesis tyrosine autokinase | EHT25_12115 | Not Available | Positive | 3017570 - 3019906 | 88024.0 |
| sugar transferase | EHT25_12120 | Not Available | Positive | 3020019 - 3020687 | 26150.1 |
| upxy family transcription antiterminator | EHT25_12125 | Not Available | Positive | 3020715 - 3021197 | 18600.6 |
| hypothetical protein | EHT25_12130 | Not Available | Positive | 3021370 - 3022275 | 33942.0 |
| hypothetical protein | EHT25_12135 | Not Available | Positive | 3022352 - 3023896 | 57516.6 |
| glycosyltransferase family 1 protein | EHT25_12140 | Not Available | Positive | 3023897 - 3025066 | 44403.8 |
| hypothetical protein | EHT25_12145 | Not Available | Positive | 3025069 - 3026706 | 61620.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
