Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT25_01140 | Not Available | Positive | 253419 - 256982 | 130976.0 |
| tonb-dependent receptor | EHT25_01145 | Not Available | Positive | 257263 - 259698 | 90844.9 |
| amidohydrolase | EHT25_01150 | Not Available | Positive | 259920 - 260882 | 35884.8 |
| mechanosensitive ion channel protein | EHT25_01155 | Not Available | Negative | 261094 - 263520 | 91988.1 |
| fad-binding oxidoreductase | EHT25_01165 | Not Available | Positive | 264806 - 265261 | 17104.6 |
| t9ss c-terminal target domain-containing protein | EHT25_01170 | Not Available | Positive | 265293 - 268544 | 118374.0 |
| ribonuclease z | EHT25_01175 | Not Available | Negative | 268634 - 269545 | 34755.3 |
| deoxyribose-phosphate aldolase | EHT25_01180 | Not Available | Positive | 269603 - 270370 | 27639.2 |
| sugar phosphate isomerase/epimerase | EHT25_01185 | Not Available | Positive | 270495 - 271409 | 35103.2 |
| gfo/idh/moca family oxidoreductase | EHT25_01190 | Not Available | Positive | 271531 - 272553 | 36993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
