Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metallopeptidase | EHT25_11750 | Not Available | Negative | 2927269 - 2927937 | 24525.8 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | EHT25_11755 | Not Available | Negative | 2928112 - 2928594 | 17740.6 |
| upf0104 family protein | EHT25_11760 | Not Available | Negative | 2928684 - 2929724 | 38509.9 |
| aspartate 1-decarboxylase | EHT25_11765 | Not Available | Negative | 2929851 - 2930198 | 12761.5 |
| pantoate--beta-alanine ligase | EHT25_11770 | Not Available | Negative | 2930312 - 2931154 | 30782.1 |
| glycogen synthase | EHT25_11775 | Not Available | Positive | 2931355 - 2932164 | 31231.3 |
| duf4270 family protein | EHT25_11780 | Not Available | Positive | 2932073 - 2933533 | 52519.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | EHT25_11785 | Not Available | Positive | 2933743 - 2935596 | 67795.9 |
| rida family protein | EHT25_11790 | Not Available | Positive | 2935722 - 2936093 | 13157.9 |
| glutamate--trna ligase | EHT25_11795 | Not Available | Positive | 2936168 - 2937691 | 56800.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
