Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | EHT25_11700 | Not Available | Positive | 2912458 - 2914704 | 81967.1 |
| susc/raga family tonb-linked outer membrane protein | EHT25_11705 | Not Available | Positive | 2915424 - 2918567 | 113805.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_11710 | Not Available | Positive | 2918589 - 2920055 | 53437.6 |
| hypothetical protein | EHT25_11715 | Not Available | Positive | 2920080 - 2920559 | 16554.2 |
| histidinol-phosphate aminotransferase family protein | EHT25_11720 | Not Available | Positive | 2920592 - 2921740 | 42027.7 |
| 3-dehydroquinate synthase | EHT25_11725 | Not Available | Positive | 2921880 - 2922905 | 37958.1 |
| duf4136 domain-containing protein | EHT25_11730 | Not Available | Positive | 2923042 - 2923578 | 20706.8 |
| gliding motility-associated abc transporter atp-binding subunit glda | EHT25_11735 | Not Available | Negative | 2923623 - 2924567 | 34604.9 |
| duf1311 domain-containing protein | EHT25_11740 | Not Available | Positive | 2924773 - 2925216 | 16886.6 |
| amino acid permease | EHT25_11745 | Not Available | Positive | 2925227 - 2926894 | 60092.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
