Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vut family protein | EHT25_01090 | Not Available | Negative | 238925 - 239710 | 28902.6 |
| pyridoxal phosphate-dependent aminotransferase | EHT25_01095 | Not Available | Negative | 239833 - 241044 | 44882.0 |
| rna-directed dna polymerase | EHT25_01100 | Not Available | Negative | 241103 - 242920 | 70724.0 |
| glutamate synthase subunit beta | EHT25_01105 | Not Available | Negative | 243008 - 244495 | 54313.1 |
| glutamate synthase large subunit | EHT25_01110 | Not Available | Negative | 244594 - 249165 | 169330.0 |
| hypothetical protein | EHT25_01115 | Not Available | Positive | 249202 - 249408 | 8060.99 |
| alpha/beta hydrolase | EHT25_01120 | Not Available | Negative | 249757 - 250623 | 32071.0 |
| hypothetical protein | EHT25_01125 | Not Available | Negative | 250653 - 250892 | 9049.81 |
| hypothetical protein | EHT25_01130 | Not Available | Negative | 250893 - 251243 | 13260.0 |
| sensor protein lyts | EHT25_01135 | Not Available | Negative | 251697 - 253097 | 53313.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
