Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | EHT25_11350 | Not Available | Positive | 2829567 - 2830652 | 39725.3 |
| dha2 family efflux mfs transporter permease subunit | EHT25_11355 | Not Available | Positive | 2830655 - 2832232 | 57002.5 |
| tolc family protein | EHT25_11360 | Not Available | Positive | 2832286 - 2833584 | 48134.2 |
| acyl carrier protein | EHT25_11365 | Not Available | Positive | 2833730 - 2833969 | 9078.76 |
| 2-phosphosulfolactate phosphatase | EHT25_11370 | Not Available | Negative | 2834090 - 2834806 | 26494.0 |
| glycine cleavage system aminomethyltransferase gcvt | EHT25_11375 | Not Available | Negative | 2834906 - 2836000 | 40092.9 |
| carboxypeptidase-like regulatory domain-containing protein | EHT25_11380 | Not Available | Positive | 2836107 - 2837015 | 33865.0 |
| uma2 family endonuclease | EHT25_11385 | Not Available | Positive | 2837068 - 2837682 | 23241.2 |
| hypothetical protein | EHT25_11390 | Not Available | Negative | 2837763 - 2838353 | 23220.2 |
| hypothetical protein | EHT25_11395 | Not Available | Negative | 2838416 - 2838697 | 10777.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
