Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1553 domain-containing protein | EHT25_11250 | Not Available | Negative | 2801255 - 2804716 | 130571.0 |
| ribonuclease inhibitor | EHT25_11255 | Not Available | Negative | 2804831 - 2806354 | 55116.2 |
| hepn domain-containing protein | EHT25_11260 | Not Available | Negative | 2806359 - 2806628 | 10257.2 |
| nucleotidyltransferase domain-containing protein | EHT25_11265 | Not Available | Negative | 2806760 - 2807086 | 12562.3 |
| hypothetical protein | EHT25_11270 | Not Available | Negative | 2807083 - 2809050 | 73091.4 |
| 6-bladed beta-propeller | EHT25_11275 | Not Available | Negative | 2809077 - 2810144 | 39525.8 |
| hypothetical protein | EHT25_11280 | Not Available | Negative | 2810186 - 2810578 | 15440.1 |
| sigma-70 family rna polymerase sigma factor | EHT25_11285 | Not Available | Positive | 2810793 - 2811464 | 25977.0 |
| duf4974 domain-containing protein | EHT25_11290 | Not Available | Positive | 2811508 - 2812509 | 38219.5 |
| tonb-dependent receptor | EHT25_11295 | Not Available | Positive | 2812951 - 2816070 | 113699.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
