Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | EHT25_11200 | Not Available | Negative | 2791152 - 2791805 | 24739.8 |
| abc transporter atp-binding protein | EHT25_11205 | Not Available | Negative | 2791878 - 2793761 | 71309.0 |
| formylglycine-generating enzyme family protein | EHT25_11210 | Not Available | Positive | 2793944 - 2794939 | 37133.0 |
| type ii toxin-antitoxin system higb family toxin | EHT25_11215 | Not Available | Positive | 2794999 - 2795301 | 11666.8 |
| transcriptional regulator | EHT25_11220 | Not Available | Positive | 2795298 - 2795648 | 13197.1 |
| gfo/idh/moca family oxidoreductase | EHT25_11225 | Not Available | Positive | 2795695 - 2797020 | 49216.5 |
| mechanosensitive ion channel protein mscs | EHT25_11230 | Not Available | Negative | 2797121 - 2798251 | 43454.2 |
| gnat family n-acetyltransferase | EHT25_11235 | Not Available | Negative | 2798343 - 2798942 | 23200.5 |
| isopropylmalate/homocitrate/citramalate synthase | EHT25_11240 | Not Available | Negative | 2798954 - 2799355 | 15138.8 |
| duf1501 domain-containing protein | EHT25_11245 | Not Available | Negative | 2799704 - 2801152 | 54358.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
