Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit j | EHT25_11100 | Not Available | Positive | 2766547 - 2767065 | 18767.8 |
| blai/meci/copy family transcriptional regulator | EHT25_11105 | Not Available | Positive | 2767211 - 2767627 | 15854.8 |
| m56 family metallopeptidase | EHT25_11110 | Not Available | Positive | 2767624 - 2769282 | 61992.1 |
| tonb-dependent receptor | EHT25_11115 | Not Available | Positive | 2769376 - 2771826 | 91671.0 |
| hypothetical protein | EHT25_11120 | Not Available | Negative | 2771833 - 2773320 | 55200.6 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | EHT25_11125 | Not Available | Negative | 2773345 - 2774727 | 53249.1 |
| glycosyltransferase family 4 protein | EHT25_11130 | Not Available | Negative | 2775001 - 2776119 | 42556.1 |
| glycosyltransferase family 1 protein | EHT25_11135 | Not Available | Negative | 2776205 - 2777284 | 40656.2 |
| o-antigen ligase domain-containing protein | EHT25_11140 | Not Available | Negative | 2777312 - 2778607 | 48795.3 |
| glycosyltransferase | EHT25_11145 | Not Available | Negative | 2778604 - 2779344 | 28463.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
